visible CA-glue I am scratching away with a sharp chisel.
But in principle I try to avoid using CA - I am using for most connections waterbased wood glue.
You are saying, that sometimes you have to much glue there, so I interprete this, that you use directly the bottles - with this you are not able to dimension the volume of glue in a accurate way.
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some modelers are using syringes -
I f.e. put a bigger drop of glue (CA or wood-glue) on a piece of paper and take over a small volume of glue on the tip of a toothpick